PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW25104.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 315aa    MW: 35753.6 Da    PI: 5.8439
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW25104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +l++     G  +W+++++  g+ R++k+c++rw +yl
       RWW25104.1 14 KGPWTADEDRKLINFLLTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding46.67.9e-1570130447
                      S-HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqky 47 
                       +++E++  ++++ qlG+                   +W++Ia++++ gRt++++k++w+++
       RWW25104.1  70 LSEDEEKMVIELHSQLGNScwipldrtkpssvcflsyRWSKIASHLP-GRTDNEIKNHWNTH 130
                      589***************9****************************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAD EDRKLINFLL TNGHCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SEDEEKMVIE LHSQLGNSCW IPLDRTKPSS VCFLSYRWSK IASHLPGRTD  120
NEIKNHWNTH VKKKLRRMGV DPMTHKPIPS ADELPHQQQQ QVRTLSDENK SSDKLGLQHS  180
STTAEMEAEE DSIMTSQFTP TETEAFLCKS PGFCTDEVPM MEPHEMLVPC AVAASSASCA  240
ALPSPSCSSV DSSFKPEDLQ LPFVEWPESI CLWGADDFGG WDSIYDEWDG KLGFDPFNQR  300
QRAVLDQESW KFELF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.11e-86MYB family protein