PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW24872.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 226aa MW: 25765.5 Da PI: 10.2629 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 68.2 | 1.3e-21 | 96 | 157 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE....EES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit....YegeHnh 58 ++Dgy+WrKYGqK+ ++++fpr+Y+rC++a +Cpvkkkv + + + ++t + eHnh RWW24872.1 96 VKDGYQWRKYGQKVTRDNPFPRAYFRCSFApSCPVKKKVRKRS-SFLMSHTTadrlTRREHNH 157 58***************************99********9887.3333333311114556666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MQREREVFLA STRFGDIEAK LNQISEENKR LSEMVSNMLT DYVALSGGVP ALPKRKRIET 60 STSGDEEPCK RGRAYPPPNT SKAYVRFDPK NTGLVVKDGY QWRKYGQKVT RDNPFPRAYF 120 RCSFAPSCPV KKKVRKRSSF LMSHTTADRL TRREHNHKHL PQDEVYVGGI PCRPLQQGFG 180 EQESPGFHPI LVEQMVSWLT KDPSFKATIV ATISDRLLLQ QAPVPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25000.1 | 7e-38 | WRKY family protein |