PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW24469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 220aa MW: 24153 Da PI: 6.9067 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 110.3 | 8.6e-35 | 18 | 76 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagCpv+k+ver+++dpk+v++tYeg+Hnh+ RWW24469.1 18 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHDPKAVITTYEGKHNHD 76 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MNHEPRVVVQ TVSEVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTSAGCP VRKHVERASH 60 DPKAVITTYE GKHNHDVPAA KTANHEASAS MVIDGDNSLS THASAAMNGL MSMRHFTSPF 120 IQMESNTISL DLGVGISPIQ REMTNGKQQC LENFQIQHQP QCVDSGNLAI QTTPLSNLHG 180 SSHTRIYLSG EDDGEGFTFK ATPISSEMYY STAGNLVMGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.1 | 3e-52 | WRKY family protein |