PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24455.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 399aa MW: 43637.4 Da PI: 9.8775

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.8	2.2e-06	176	198	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+Cg+ F r+++L+ H+ + H RWW24455.1 176 TCPHCGEIFVRPESLELHQAVrH 198 8******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
ASSRRQKLRE TKAPSAMAGT GEARRKLKRS NRSKKQEQRR AKKSPAWRAL RNFFSCKDQS 60 DVRGRKNGKK RDSTSEASQE ATTAAAVNPC NTSSRSLRSP CKDASGDIST SFASSYSSAS 120 IVASATTSSS SSSSSVGGSF PGMHLRRLSG CYECHVMVDP INGPSRDPSM RVSICTCPHC 180 GEIFVRPESL ELHQAVRHAE LGPEDTSRNI IEIIFQSSWL KNRTPVCKID RILKVHNTPK 240 AIARFEDYRD SIKTKADNKV ARKHPRCVAD GNELLRFHCT TLACSLGVNG STSLCQSTER 300 CNVCSIIRDG FKLDEVGKIQ TMGTSGRAHD MARVSSSDEE KRAMLVCRVI AGRVNKSQDA 360 VDEFDSVAGS AGTYSSIDEL FVFSPKAILP CFVVIYTGF

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

ASSRRQKLRE TKAPSAMAGT GEARRKLKRS NRSKKQEQRR AKKSPAWRAL RNFFSCKDQS  60
DVRGRKNGKK RDSTSEASQE ATTAAAVNPC NTSSRSLRSP CKDASGDIST SFASSYSSAS  120
IVASATTSSS SSSSSVGGSF PGMHLRRLSG CYECHVMVDP INGPSRDPSM RVSICTCPHC  180
GEIFVRPESL ELHQAVRHAE LGPEDTSRNI IEIIFQSSWL KNRTPVCKID RILKVHNTPK  240
AIARFEDYRD SIKTKADNKV ARKHPRCVAD GNELLRFHCT TLACSLGVNG STSLCQSTER  300
CNVCSIIRDG FKLDEVGKIQ TMGTSGRAHD MARVSSSDEE KRAMLVCRVI AGRVNKSQDA  360
VDEFDSVAGS AGTYSSIDEL FVFSPKAILP CFVVIYTGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	2e-91	C2H2 family protein