PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24333.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 272aa    MW: 29439.2 Da    PI: 6.2503
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.47e-312105199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a p++ ++++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e+
  RWW24333.1   2 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINAGPDHLHPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEA 100
                 6*************************************************************************************************9 PP

      DUF260  95 allke 99 
                 +l ++
  RWW24333.1 101 VLKGA 105
                 98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MSCNGCRVLR KGCSENCSIR PCLQWIKSPE SQANATVFLA KFYGRAGLMN LINAGPDHLH  60
PAIFRSLLYE ACGRIVNPIY GSVGLLWSGS WQLCQAAVEA VLKGAPIVQI PSETAASTPG  120
PPLQACDIRH VFKKPRATAE LLEVNKPRSL FKRSGSKAAR TATARPEFRR ARSHESGASH  180
PTEPAAAVVE RNREDGECRE NECMSLADTA EEASHVSQGE PDETEEEEEE ELGLELTLGF  240
KPVSRLSRPA VSDRDTQACT ADLNLAPPSA SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.17e-82LBD family protein