PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24242.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 497aa    MW: 54346.5 Da    PI: 4.4303
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH231.4e-0781110127
                 --S---SGGGGTS...--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartG...tCkyGdrCkFaHgp 27 
                 +kt+lC+f++r      C++Gd C++aHg+
  RWW24242.1  81 WKTSLCSFYRRQPgkvGCSHGDACRYAHGE 110
                 8********99548**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    
MPAMEMTAPP PSEENEVATR ESTVAVVSAG NDALEVGHGV DSSSAKRKRE EEEEEEKEVE  60
GVEETKVSDA GDGKTRRDLL WKTSLCSFYR RQPGKVGCSH GDACRYAHGE AELRIRPDNT  120
WDPTSERAKK LLRASNNVDD AKAESLEAED PTVDVTSLDK CLIGLPRKWA SDNLKSFLDG  180
QTRNARKACP ASVALPEWIT KSREIGKVRE GRKTSQTSTE NAENSVVEVM LIIQVCTVVG  240
IEMNASAVSD AQRNAMINDI KNCRFVCGKV CLLAFNDFGC QAEDVVGALL KEYLDVPKQH  300
GIISDVLSMS HTGNYDVMYD TVNRAIIEFD TRTLLIVLSA EASEEEMLSC PENGPNKNLE  360
PEGVSVENYD GEVKSEASLE GCCSEENLTS DSMAVDGPDK DFNVSLETMG TCSAECSETT  420
EDNQVCKEPT EEKCASKDED GAGMHQFKNV VAIVDPPRVG LHPVVSNATF FCNQSFKDSS  480
TYKASRVRSS TATHLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28450.13e-26C3H family protein