PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW24072.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 237aa MW: 26650 Da PI: 7.2195

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW24072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.9	2.7e-14	21	69	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd +l+ +++ +G g +W + ++++g++R++k+c++rw++yl RWW24072.1 21 RGLWSAEEDAKLKSYIEHHGIGgSWISLPQKIGLKRCGKSCRLRWLNYL 69 788***************999**********************97 PP
2	Myb_DNA-binding	44.1	4.9e-14	76	118	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++eEde++ ++ G++ W++Ia ++ gRt++++k++w++ RWW24072.1 76 GEYSEEEDEIICRLYLTIGSR-WSSIATQLP-GRTDNDIKNHWNT 118 6789***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
TPNLTAAMGR APCCDKANVK RGLWSAEEDA KLKSYIEHHG IGGSWISLPQ KIGLKRCGKS 60 CRLRWLNYLQ PNLKHGEYSE EEDEIICRLY LTIGSRWSSI ATQLPGRTDN DIKNHWNTRL 120 KKKLLGKPQK HHRQARRGTA SQQQVKFQEN EILVQLPPLE AAHRPASSGM DDSHGEASGG 180 SNGFPSELEE ILRFDPATLQ GLDYLYEARG MADESSGTST PEESMNWDEM IPFMYPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	2e-74	MYB family protein