PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW24069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 276aa MW: 30700.7 Da PI: 8.5774 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.1 | 3.4e-39 | 6 | 104 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cvlapyfp +q+ +f +vh++FGas+v ++l++l++ +r+da++++vyeAear+r+PvyG+v+ i+ lqq+le+ ++el +++ RWW24069.1 6 PCAACKFLRRKCTPKCVLAPYFPPDQETNFVYVHRVFGASKVARILRDLSPAQRQDAVTTMVYEAEARLREPVYGCVASIRLLQQRLERIQNELYNARK 104 7********************************************************************************************987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MSSNAPCAAC KFLRRKCTPK CVLAPYFPPD QETNFVYVHR VFGASKVARI LRDLSPAQRQ 60 DAVTTMVYEA EARLREPVYG CVASIRLLQQ RLERIQNELY NARKVLATYI GPAAFDPFLP 120 SPHRQQQDQH GHHQGSYPSS TATCGVLGMG TVAGLGVAAP GTSQYPQIMI PEQAQQQPQI 180 VEAQQMAKAA ALAAAREQEM LRSFEQQQEP ARFDSGFLDS GAPSELPLVP AHPFELSFAV 240 HPQHYPEQQQ QQQWQRQPQH QRARSHYGRS GIGPSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 1e-51 | LBD family protein |