PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW24069.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 276aa    MW: 30700.7 Da    PI: 8.5774
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW24069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.13.4e-396104199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrrkC+++Cvlapyfp +q+ +f +vh++FGas+v ++l++l++ +r+da++++vyeAear+r+PvyG+v+ i+ lqq+le+ ++el  +++
  RWW24069.1   6 PCAACKFLRRKCTPKCVLAPYFPPDQETNFVYVHRVFGASKVARILRDLSPAQRQDAVTTMVYEAEARLREPVYGCVASIRLLQQRLERIQNELYNARK 104
                 7********************************************************************************************987765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MSSNAPCAAC KFLRRKCTPK CVLAPYFPPD QETNFVYVHR VFGASKVARI LRDLSPAQRQ  60
DAVTTMVYEA EARLREPVYG CVASIRLLQQ RLERIQNELY NARKVLATYI GPAAFDPFLP  120
SPHRQQQDQH GHHQGSYPSS TATCGVLGMG TVAGLGVAAP GTSQYPQIMI PEQAQQQPQI  180
VEAQQMAKAA ALAAAREQEM LRSFEQQQEP ARFDSGFLDS GAPSELPLVP AHPFELSFAV  240
HPQHYPEQQQ QQQWQRQPQH QRARSHYGRS GIGPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.11e-51LBD family protein