PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23856.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ERF

Protein Properties

Length: 604aa MW: 65366.5 Da PI: 8.8956

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23856.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.6	2e-15	19	67	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aaka++ a +l+g RWW23856.1 19 FRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYCTPVAAAKAYDTALFYLRG 67 8**999.******9...336***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MEGQLPPEKA ATRPKERPFR GIRMRKWGKW VAEIREPNKR SRIWLGSYCT PVAAAKAYDT 60 ALFYLRGRTA RLNFPDDISI DDRGTTTDMS AASIRKKAAE VGAKVDALQM NAAALFGSQE 120 DPRQEGETRF SCVLQLLVGL LHRWLLSSSI VAASHSSPPA ATSTAAPPNR RAPVPQRSLL 180 PATPSSSAPT HNIITFASCC CSALVPLLIV AACNPTPPAI PAISYYNRCN PLSQPPSHSC 240 LPCCSTCLQP SLPCFSSPMP STATSLLQPT QLHLPPSLLV VPSSATEITF FPSLTHHYRN 300 CFQLQHFASS AFSPTAVASS RPYPYYRCHC RCPRPPLKPS SSSPVVDLAI PCRCFLWLFH 360 PSLALLGRCS THLPLLPSSF SSQPSIVPSP STVVAAPDCR CCLLFNRSLS HLYHRRCSLS 420 NLSLPTATIA APPIAHPSST NASSAVVSPA SLALSHAFLP PHLHHHHCQL PDPVLSNLFP 480 ATAAIASHNH CPSPISSYAS SITIAANPYR CHLSPVTAAT HLCLLPCCCY PRCHSRFQSR 540 PCRCTSLLPP LQLLATTVAP TISNQLFDIL VILTSIISLR SSPITSTMQT HAPDSTVEKR 600 TEHR

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MEGQLPPEKA ATRPKERPFR GIRMRKWGKW VAEIREPNKR SRIWLGSYCT PVAAAKAYDT  60
ALFYLRGRTA RLNFPDDISI DDRGTTTDMS AASIRKKAAE VGAKVDALQM NAAALFGSQE  120
DPRQEGETRF SCVLQLLVGL LHRWLLSSSI VAASHSSPPA ATSTAAPPNR RAPVPQRSLL  180
PATPSSSAPT HNIITFASCC CSALVPLLIV AACNPTPPAI PAISYYNRCN PLSQPPSHSC  240
LPCCSTCLQP SLPCFSSPMP STATSLLQPT QLHLPPSLLV VPSSATEITF FPSLTHHYRN  300
CFQLQHFASS AFSPTAVASS RPYPYYRCHC RCPRPPLKPS SSSPVVDLAI PCRCFLWLFH  360
PSLALLGRCS THLPLLPSSF SSQPSIVPSP STVVAAPDCR CCLLFNRSLS HLYHRRCSLS  420
NLSLPTATIA APPIAHPSST NASSAVVSPA SLALSHAFLP PHLHHHHCQL PDPVLSNLFP  480
ATAAIASHNH CPSPISSYAS SITIAANPYR CHLSPVTAAT HLCLLPCCCY PRCHSRFQSR  540
PCRCTSLLPP LQLLATTVAP TISNQLFDIL VILTSIISLR SSPITSTMQT HAPDSTVEKR  600
TEHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67190.1	3e-47	ERF family protein