PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 26695.2 Da PI: 5.2935 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 2.9e-09 | 53 | 103 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-ST..CHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKls..KaeiLekAveYIksL 54 r+h e+ErrRR+ri+s +++Lr++l + p+ ls Ka+ L k+ve +k+L RWW23793.1 53 RNHREAERRRRERIKSHLDRLRSILACD---PKVLLSryKASLLAKVVERMKDL 103 78*************************8...66666655999999999999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
RGRRDQAGMS NGLPAYFVSS FYPHMEVEME MAMEMSGDAI DATPMDRALA ASRNHREAER 60 RRRERIKSHL DRLRSILACD PKVLLSRYKA SLLAKVVERM KDLKQRTEEI ADTQFFPTET 120 DEIVVLPSSA AISGQRSAFE ASLCCEDRSD LLPELIETLR SLHLKTLRAE IATLGGRVRN 180 VLILAKDEEA YEDADDEDDD DDSGGAFLRD ALKALVDRSL PAERCKRRRL VDRNPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 59 | 64 | ERRRRE |
2 | 226 | 230 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 4e-39 | bHLH family protein |