PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23480.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 332aa MW: 36717.4 Da PI: 9.7369

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.3e-12	52	100	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f + eAa+a++ a ++++g RWW23480.1 52 SQYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNGESEAARAYDVAVQRFRG 100 78**9888.8*****3.....5******88**********998 PP
2	B3	103.8	9.3e-33	178	273	1	90
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f k++tpsdv+k++rlv+pk++ae+h gg +++ l++ed+sg++W ++++y+++s++yvltkGW++Fvk++gL++gD+v+F+++ e+ RWW23480.1 178 FYKAMTPSDVGKLNRLVIPKQHAEKHfpvmetGGAASRGVLLSFEDSSGKVWLFRYSYWNSSQSYVLTKGWSRFVKEKGLEAGDVVTFQRSTGPEK 273 789***************************88889**************************************************7654444 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MNSAEVACGE IRKRASPRVA GPKSLQRVGS GGSDVIDPEV GVEAESRKLP PSQYKGVVPQ 60 PNGRWGAQIY EKHQRVWLGT FNGESEAARA YDVAVQRFRG RDAITNFRPL NDADNDDDAA 120 ELFFLGSHSK AEIADMLRKH TYHEELQQSK RSFGADTKAA TSPGDTKSAM GTQRQHLFYK 180 AMTPSDVGKL NRLVIPKQHA EKHFPVMETG GAASRGVLLS FEDSSGKVWL FRYSYWNSSQ 240 SYVLTKGWSR FVKEKGLEAG DVVTFQRSTG PEKQLFIDSK PPVQIFRLFG VNIVRTPAAL 300 PAACCGTGKR TRDLTELASS QEMVKKQCTE TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	1e-127	RAV family protein