PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW23332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WOX | ||||||||
Protein Properties | Length: 229aa MW: 25007.8 Da PI: 4.631 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.8 | 6.8e-22 | 90 | 150 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t++ql++Le+ F++ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ RWW23332.1 90 RQRWTPTPTQLQILETIFYEgNGTPSKQKIKEITSELtqhgQISETNVYNWFQNRRARSKR 150 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 101.9 | 4.5e-33 | 89 | 152 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp+Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++k+ RWW23332.1 89 SRQRWTPTPTQLQILETIFYEGNGTPSKQKIKEITSELTQHGQISETNVYNWFQNRRARSKRKK 152 689***********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
GGTRSVVDIG SGSMEEGAAE EGDVCAKVMT DEQMEVLRKQ IAAYATICEQ LVEMHRAIAA 60 QQDWLSGMRL GSLCSDPLMA PGVAELSSSR QRWTPTPTQL QILETIFYEG NGTPSKQKIK 120 EITSELTQHG QISETNVYNW FQNRRARSKR KKQPAAGPNA AESEAEVESL NEKKAKAETF 180 AHGDLSPTLD EGRFQSPDIS SELRFGDPES NGSQGMFALG DISKYGDAF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 176 | KRKKQPAAGPNAAESEAEVESLNEKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 5e-64 | WOX family protein |