PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW23164.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 651aa MW: 71352.4 Da PI: 9.1704

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW23164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.3e-16	86	131	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia + gR++k+c++rw++ RWW23164.1 86 RGHWRPAEDAKLKELVSQYGPQNWNLIADNLE-GRSGKSCRLRWFNQ 131 899***************************.*********996 PP
2	Myb_DNA-binding	49.4	1e-15	138	182	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++++eE+e+l+ a +++G++ W++Iar ++ gRt++ +k++w+ RWW23164.1 138 RRAFSEEEEERLLAARRLYGNK-WALIARLFP-GRTDNGVKNHWHVM 182 678*****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 651 aa Download sequence
MGLNQLKPTA DMGFFPPPPP PSFLKALSSP SGERECMSVK HGGRLQGLKS WQEHHKAEET 60 DDHGEEDEGG NGATDESVEQ HKLCARGHWR PAEDAKLKEL VSQYGPQNWN LIADNLEGRS 120 GKSCRLRWFN QLDPRINRRA FSEEEEERLL AARRLYGNKW ALIARLFPGR TDNGVKNHWH 180 VMMARKQREQ SSGHRRRKPP TPSSLSSPLT EALLRRVEVN SSSYLSCSGE STITSTKDES 240 ASTCTTELSL NSFTTMVAAN SQSRHSPPHR AHLHDPVIGI FPLMLLGKII AWLDGEATDV 300 REKIGLPFID FLGKDTDKHE HFIEHLIYIV VRDITLLPSL AAAISLSPLP QPTPAPNLPM 360 LLPSLAVAIS LSPLPQPMSS PFLPMLLPSL AVAISLSPLP QPTPSPFLLY CCPTAPSRAL 420 LTFFPRFQLR PLPLASRALL TFLPRFQSRP LSLPSRTLLC HRDRRLLPVS SPASSSATEI 480 TFFPSPLLPI LLNRSRSRTL LCCHQSSAAI SCRSTAASND LVANSCDLSL HNVVSSDLSP 540 AAHRCHLCSP TFRGNLPAAT LPPPSSLLPP ALPRRRRHHE SPAALCLPCH RRCHAVAPLS 600 PAAALVLPCH LAAVARSPQP LSLPSLLPAS RARRNAAAAF LLNCCLTCLL P

Sequence ? help Back to Top

Protein Sequence Length: 651 aa Download sequence

MGLNQLKPTA DMGFFPPPPP PSFLKALSSP SGERECMSVK HGGRLQGLKS WQEHHKAEET  60
DDHGEEDEGG NGATDESVEQ HKLCARGHWR PAEDAKLKEL VSQYGPQNWN LIADNLEGRS  120
GKSCRLRWFN QLDPRINRRA FSEEEEERLL AARRLYGNKW ALIARLFPGR TDNGVKNHWH  180
VMMARKQREQ SSGHRRRKPP TPSSLSSPLT EALLRRVEVN SSSYLSCSGE STITSTKDES  240
ASTCTTELSL NSFTTMVAAN SQSRHSPPHR AHLHDPVIGI FPLMLLGKII AWLDGEATDV  300
REKIGLPFID FLGKDTDKHE HFIEHLIYIV VRDITLLPSL AAAISLSPLP QPTPAPNLPM  360
LLPSLAVAIS LSPLPQPMSS PFLPMLLPSL AVAISLSPLP QPTPSPFLLY CCPTAPSRAL  420
LTFFPRFQLR PLPLASRALL TFLPRFQSRP LSLPSRTLLC HRDRRLLPVS SPASSSATEI  480
TFFPSPLLPI LLNRSRSRTL LCCHQSSAAI SCRSTAASND LVANSCDLSL HNVVSSDLSP  540
AAHRCHLCSP TFRGNLPAAT LPPPSSLLPP ALPRRRRHHE SPAALCLPCH RRCHAVAPLS  600
PAAALVLPCH LAAVARSPQP LSLPSLLPAS RARRNAAAAF LLNCCLTCLL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-53	MYB family protein