PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW22840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 34854.3 Da PI: 6.5006 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.8 | 1e-07 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g W++eEde+l++ +++ G g+W+++++ g RWW22840.1 14 KGFWSPEEDEKLYNHINRSGVGCWSSVPKLAG 45 688**************************988 PP | |||||||
2 | Myb_DNA-binding | 43.3 | 8.3e-14 | 91 | 133 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++++eE+ l++ +++ lG++ W+ Ia++++ gRt++++k+ w+ RWW22840.1 91 RGSFSQEEEGLIIALHQVLGNR-WSQIASRLP-GRTDNEIKNLWH 133 899*******************.*********.*********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGLQSCSLKQ KLRKGFWSPE EDEKLYNHIN RSGVGCWSSV PKLAGNFRLP FASSRLASCS 60 VVFFFLLVGL QRCGKSCRLR WINYLRPDLK RGSFSQEEEG LIIALHQVLG NRWSQIASRL 120 PGRTDNEIKN LWHSRIKKKL RQMGIDPITH RPLSEAAAAV QEQEIRWSNP VLDTSFEHLP 180 WIQTQECLDR SLDQDELLAE CSSVLDVPET YGHGESLSNS SNCDCHVVSW TCEGGLEPAT 240 QMQQINGVET CEEGKSSAWQ EKQHHVASTD DGGILPVRSL HRDFTNDDCG VTREALKSIL 300 NADLFPSFQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 141 | RIKKKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.2 | 2e-69 | MYB family protein |