PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW22287.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 288aa MW: 30946.7 Da PI: 10.3044

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW22287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.1	2e-27	21	71	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskRr g+lKKA+EL +LCda+v v+ifsstgkl+ey++ RWW22287.1 21 KRIENPTNRQVTFSKRRGGLLKKANELAILCDAQVGVVIFSSTGKLFEYCT 71 79***********************************************96 PP
2	K-box	52	3e-18	86	138	20	72
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel 72 e++++++e+++Lq + R++ GedL sL+l+e +qLe+qLe s++k+R++K + RWW22287.1 86 EISRMRDENDKLQASMRQFAGEDLASLTLNEVNQLEEQLEYSVNKVRARKVMY 138 89************************************************765 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
KKRREDSAKF ASMGRGKIEI KRIENPTNRQ VTFSKRRGGL LKKANELAIL CDAQVGVVIF 60 SSTGKLFEYC TFILHSMFPL KQIICEISRM RDENDKLQAS MRQFAGEDLA SLTLNEVNQL 120 EEQLEYSVNK VRARKVMYIT CLLLFPPASA AAPTTGESAS QAQLSLPRGE QSVLDMQRLY 180 LRLPGSRYVL LLKFFRWRLT AACGASGGDG ASAGGGHGAQ GGGRADAGAL RPPLRRGAVA 240 EPAAAVAPNA RIPAAADAAQ PAGGHLPGTL PAAVVIKAPK HLETESLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	7e-31	MIKC_MADS family protein