PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW21945.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 275aa MW: 30059 Da PI: 7.6637

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW21945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	158.1	1.4e-49	44	146	2	101
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 l++f ++q i ++dfknh+lPlarikki+kadedv+mi+ae+Pvl+++ace+filelt rsw haeenkrrtl+k+dia a+trtd+fdflvdivp RWW21945.1 44 LQMFRTNQyqeIAATSDFKNHSLPLARIKKIMKADEDVRMIAAEVPVLFARACEMFILELTYRSWAHAEENKRRTLQKNDIAGAITRTDVFDFLVDIVP 142 788888887678899************************************************************************************ PP NF-YC 98 rdel 101 +++ RWW21945.1 143 IEDV 146 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MMVTSLPPSA GQMTNPASQV QLTQHHLAYQ RVQQQQMNQL HQTLQMFRTN QYQEIAATSD 60 FKNHSLPLAR IKKIMKADED VRMIAAEVPV LFARACEMFI LELTYRSWAH AEENKRRTLQ 120 KNDIAGAITR TDVFDFLVDI VPIEDVKEDV LASISTDGTN ESLPYYYVPS QAGSLKMMMN 180 NSEVDQSLVL LSTLLSLRIY LDGGGDGFGI SVSHNSSGAD ITIGGGPGGG AGTARDGGAS 240 VVGGDRCWVR NPRRERRNER RGGAAASAKK GSVSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	122	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-62	NF-YC family protein