PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW21020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31363.2 Da PI: 8.6086 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.9 | 1.8e-16 | 41 | 88 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l+ v++ G g+W+t +++ g+ R++k+c++rw +yl RWW21020.1 41 RGPWTAEEDEVLASFVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 88 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.4e-16 | 95 | 139 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T++E++++++++++lG++ W++Ia +++ gRt++++k++w+++l RWW21020.1 95 GPITPDEEDIILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 139 678******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MRNPLGSLVA EEGQQQQQQQ QRRRRGVSTP TPCCSKVGMK RGPWTAEEDE VLASFVRREG 60 EGRWRTLPKR AGLLRCGKSC RLRWMNYLRP SIKHGPITPD EEDIILRLHR LLGNRWSLIA 120 GRIPGRTDNE IKNYWNTHLS RKLIKQGIDP RTHKPFTFST NPNPTLPSTP PPRHPTANPD 180 PTPSAPPAPV ATGGGYFNVG CQNSEEGRKG ADGCTVDFFS DLFDPFIHDD ILMQQHHSAV 240 NNHTDNSNSN NEMLDPMGAS LVPSFGFEGL WEDPFTYFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-78 | MYB family protein |