PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20852.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 369aa MW: 40122.9 Da PI: 10.1215

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.6	6.9e-19	15	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEde l ++v++ G+++W++I++ ++ gR++k+c++rw++ RWW20852.1 15 KGPWSSEEDEALRKLVQRNGPRNWSLISKSIP-GRSGKSCRLRWFNQ 60 79****************************.*********996 PP
2	Myb_DNA-binding	54.6	2.5e-17	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a+++lG++ W++I+r + gRt++ +k++w++ RWW20852.1 69 PFTPEEDETIIRAHRRLGNR-WAAISRLLS-GRTDNAVKNHWNST 111 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MAKAGNRSKD VGRIKGPWSS EEDEALRKLV QRNGPRNWSL ISKSIPGRSG KSCRLRWFNQ 60 LSPQVEHRPF TPEEDETIIR AHRRLGNRWA AISRLLSGRT DNAVKNHWNS TLKRRYSASA 120 AAIDGGFVVA ADREVMSARP LLRMSSDGLV LSSGGAGLCL SSESPSGSDV SDYSHHSLPM 180 ISPVSTASHV YRPVPRTGGV VLPSSSAPNR HLTEPSIAAT ATATTTSPSP ITIKDPLTSL 240 SLSLPGSDPM DSSDDRHSPD NDNSNHKQLE LLPSVPTPPQ ARSPSPTTRS TDATGAATSS 300 DEDERRWHTP FRFDAAFLTA MQEMIREEVR SYMSSLAKSG MTCAQFPLAS DNVRNAVIRR 360 ISVSATRME

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MAKAGNRSKD VGRIKGPWSS EEDEALRKLV QRNGPRNWSL ISKSIPGRSG KSCRLRWFNQ  60
LSPQVEHRPF TPEEDETIIR AHRRLGNRWA AISRLLSGRT DNAVKNHWNS TLKRRYSASA  120
AAIDGGFVVA ADREVMSARP LLRMSSDGLV LSSGGAGLCL SSESPSGSDV SDYSHHSLPM  180
ISPVSTASHV YRPVPRTGGV VLPSSSAPNR HLTEPSIAAT ATATTTSPSP ITIKDPLTSL  240
SLSLPGSDPM DSSDDRHSPD NDNSNHKQLE LLPSVPTPPQ ARSPSPTTRS TDATGAATSS  300
DEDERRWHTP FRFDAAFLTA MQEMIREEVR SYMSSLAKSG MTCAQFPLAS DNVRNAVIRR  360
ISVSATRME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	3e-62	MYB family protein