PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20742.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WRKY

Protein Properties

Length: 410aa MW: 45331.5 Da PI: 6.9456

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	29.6	1.4e-09	140	160	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +Dgy+WrKYGqKe+ g+++pr RWW20742.1 140 EDGYSWRKYGQKEILGARHPR 160 8*******************9 PP
2	WRKY	41.4	2.8e-13	203	244	20	58
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 r+YYrC+++ gC ++k+v+rs++dp v +itY+geH++ RWW20742.1 203 SRRGYYRCSHRnsvGCLATKQVQRSDKDPCVYDITYRGEHTC 244 569*****99999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGSTGTWDLS SLLRLLAQGE EQARQLEAYL EAPSPAEHCK SLLQRVRSTL EEAISMAKLA 60 DYEMSRQPAC HNTIAESAAA AAAAAASDSP RSNSGSPRSE SSERVFKEHE RMEMCKKRKT 120 LPKWTNQVRV SSGGVTEGLE DGYSWRKYGQ KEILGARHPR LEISSVSSPV LSVSSKLDNR 180 GCFLAYNHQK PSLIFGHSQL AHSRRGYYRC SHRNSVGCLA TKQVQRSDKD PCVYDITYRG 240 EHTCLQRPQP SPLPEPELQQ SHDNPLTIHE ALLHHPRQHQ QSSLRVETEG LNMRDQVLSS 300 SFSFPSTPLD SFGPQSHVFS PTNPLENTSY VGSFSPFISP TTSESNYFSV SPCQMSGYGG 360 AIAPNTSESD LTEIISAATS TTNSPKLDAA FMLDHAEFDQ IFPFNAPKFF

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGSTGTWDLS SLLRLLAQGE EQARQLEAYL EAPSPAEHCK SLLQRVRSTL EEAISMAKLA  60
DYEMSRQPAC HNTIAESAAA AAAAAASDSP RSNSGSPRSE SSERVFKEHE RMEMCKKRKT  120
LPKWTNQVRV SSGGVTEGLE DGYSWRKYGQ KEILGARHPR LEISSVSSPV LSVSSKLDNR  180
GCFLAYNHQK PSLIFGHSQL AHSRRGYYRC SHRNSVGCLA TKQVQRSDKD PCVYDITYRG  240
EHTCLQRPQP SPLPEPELQQ SHDNPLTIHE ALLHHPRQHQ QSSLRVETEG LNMRDQVLSS  300
SFSFPSTPLD SFGPQSHVFS PTNPLENTSY VGSFSPFISP TTSESNYFSV SPCQMSGYGG  360
AIAPNTSESD LTEIISAATS TTNSPKLDAA FMLDHAEFDQ IFPFNAPKFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	2e-27	WRKY family protein