PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW20713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | YABBY | ||||||||
Protein Properties | Length: 151aa MW: 16820.1 Da PI: 9.9121 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 163.9 | 1.2e-50 | 1 | 124 | 31 | 170 |
YABBY 31 lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsay 129 +f+vvtvrCGhC++llsvn+ q+ + ++ ++++ ++ +++l+ +++++ s+ s+ ++++++ + + rPPekrqrvPsay RWW20713.1 1 MFNVVTVRCGHCANLLSVNMGALLQAFPLQDF--------QVHNFGSPSNKLEIGSSSRRNRSSLYSM---TDEQQQ-IV----ALRPPEKRQRVPSAY 83 69**************************9996........5667777777666665555555554444...445544.44....48************* PP YABBY 130 nrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 nrfi+eeiqrika+nPdish+eafsaaaknWahfP+ihfgl RWW20713.1 84 NRFIREEIQRIKANNPDISHKEAFSAAAKNWAHFPHIHFGL 124 ***************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MFNVVTVRCG HCANLLSVNM GALLQAFPLQ DFQVHNFGSP SNKLEIGSSS RRNRSSLYSM 60 TDEQQQIVAL RPPEKRQRVP SAYNRFIREE IQRIKANNPD ISHKEAFSAA AKNWAHFPHI 120 HFGLTLDGSK QVKLDDAIAA APGGEKAPGF Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 1e-54 | YABBY family protein |