PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20471.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 296aa MW: 32401.4 Da PI: 7.9622

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.8	1.6e-42	6	104	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp +qp kf +vh++FGasnv kll++l + +reda++sl+yeAear+rdPvyG+vg i+ lq++l+q++++l +k+ RWW20471.1 6 PCAACKFLRRKCTPGCVFAPYFPPDQPTKFVYVHRVFGASNVAKLLSELTPAQREDAANSLAYEAEARLRDPVYGCVGYISLLQHKLKQVQHDLYNAKK 104 7********************************************************************************************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MSSNSPCAAC KFLRRKCTPG CVFAPYFPPD QPTKFVYVHR VFGASNVAKL LSELTPAQRE 60 DAANSLAYEA EARLRDPVYG CVGYISLLQH KLKQVQHDLY NAKKDLATYI GPAAFGPFLL 120 PPHHPHQYQQ QQQQQQHHHL QGPSPSSTAT YGAPGMGMGM GLGLSPTQPS TSHHPQILMR 180 EPQQQSPQQI AEAQQMAMAV AAAREQEMMR NYDQQQELAR FNTGFPDGGR DYNQIGDGTM 240 AAMPVAPSSG LGLVPAQPFD GSFAVNQMQP PPPQQQQQQH QRARSDDGRS GIGPST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-64	LBD family protein