PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW20337.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 333aa MW: 37163.5 Da PI: 6.1818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW20337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.7e-16	14	99	1	46
TSSS-HHHHHHHHHHHHHTTTT.........................................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........................................tWktIartmgkgRtlkqcksrwqk 46 +g+W++eEd +l+ +v+++G+g +W+ Ia+ ++ gRt++++k++w++ RWW20337.1 14 KGPWSPEEDAKLKSYVEEHGTGgnwialpqkigqeqvnhtpptplslpqslssfhdntplsciRWSIIAAQLP-GRTDNDIKNYWNT 99 79*********************************************************************.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGRAPCCDKT NVKKGPWSPE EDAKLKSYVE EHGTGGNWIA LPQKIGQEQV NHTPPTPLSL 60 PQSLSSFHDN TPLSCIRWSI IAAQLPGRTD NDIKNYWNTR LKKKLLGKQR EPNRSRSLHL 120 NQVPGGAADW LKHEAPSQTL STSALERMQL HMQLQGLHNP FSFYNHPQLW PKYYHPLGDK 180 IFQSQTADAT ATTLVQQASD VSPLKPDVSK LMSTNIQEMD CFPLGFRSPS TGGTLSMETS 240 SSNMDSATAG VPADDLHDLL YGKNASIVGH EEHQLADLDC YREIYGQAES TNWWPTEGFM 300 DQTAMVSWDS ASALHSEFMW QENGLRFGLQ EGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	8e-63	MYB family protein