PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW20260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 413aa MW: 44386.1 Da PI: 8.07 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.6 | 8.3e-19 | 332 | 366 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l RWW20260.1 332 CSHCGAQKTPQWRAGPLGAKTLCNACGVRFKSGRL 366 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence |
MVDLEVGGHS IFHMTLVPFS SPSSPPPPPL SPFLIPQPAS IPLPLGPLQL PSPVPSLVYF 60 NCSQVESEAR MEEALKHSMP ESSLYSGQQR LQQQQQNRVT VNEEWGWAAE RGNLVGEGFS 120 VDDLLDLGDY AENDKEAEAA KGVVEEVATK AEAPEAGNGE RADSNNSSPP STSSTLSFQS 180 RRTHLSEISL PAHDAEELEW VSLVIEGSTS EFLQCPGVAN TTSAPPRHGQ TGIPAVAAAQ 240 GASPKSPAVC GFSKAVIVPM KAKRSKRCRS AAAWNTSISC LVDDRHPAAS ADQSFLLYDA 300 TPPPAKNQRP KKRGRKPKPP ATAASGSCER RCSHCGAQKT PQWRAGPLGA KTLCNACGVR 360 FKSGRLLPEY RPACSPTFVN HIHSNSHRKV LEMRRKKEAE LLIFPAAPPV PSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 3e-39 | GATA family protein |