PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 413aa    MW: 44386.1 Da    PI: 8.07
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.68.3e-19332366135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  RWW20260.1 332 CSHCGAQKTPQWRAGPLGAKTLCNACGVRFKSGRL 366
                 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MVDLEVGGHS IFHMTLVPFS SPSSPPPPPL SPFLIPQPAS IPLPLGPLQL PSPVPSLVYF  60
NCSQVESEAR MEEALKHSMP ESSLYSGQQR LQQQQQNRVT VNEEWGWAAE RGNLVGEGFS  120
VDDLLDLGDY AENDKEAEAA KGVVEEVATK AEAPEAGNGE RADSNNSSPP STSSTLSFQS  180
RRTHLSEISL PAHDAEELEW VSLVIEGSTS EFLQCPGVAN TTSAPPRHGQ TGIPAVAAAQ  240
GASPKSPAVC GFSKAVIVPM KAKRSKRCRS AAAWNTSISC LVDDRHPAAS ADQSFLLYDA  300
TPPPAKNQRP KKRGRKPKPP ATAASGSCER RCSHCGAQKT PQWRAGPLGA KTLCNACGVR  360
FKSGRLLPEY RPACSPTFVN HIHSNSHRKV LEMRRKKEAE LLIFPAAPPV PSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-39GATA family protein