PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW20094.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 444aa    MW: 49675.6 Da    PI: 5.8892
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW20094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS442.43.2e-135744441374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++ L++cA+av+++dl ++++l+++l+ ++s  g+p+qRl ay++e+L arla+s+s++yka +++e +   ss+ l+++++++ev+P++kf++l aN
  RWW20094.1  74 LKQFLIACARAVAENDLIAVEWLISELKRMVSVFGEPIQRLGAYLLEGLIARLASSGSSIYKASKCKEPA---SSDLLSYMHILYEVCPYFKFGYLSAN 169
                 5789*****************************************************************9...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI+eav+ge++vHiiDf+i+qG QW++L+qa+a+ p+gpp++RiTg++++ s   +   l+ +g+rL+++Ae+++vpfef+  +a +  d+ele+L++
  RWW20094.1 170 GAIVEAVKGENMVHIIDFQITQGSQWVTLIQAFAAMPGGPPRIRITGIDDNVSAyaRGGGLHIVGQRLSRLAESCNVPFEFHS-AAMSSCDVELEHLDI 267
                 **************************************************988899999************************.899999********* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEala+n+ l+lh+++desvs++++rd++L+++ks sPkvv++ve+ea++n+++F+ rfle+l+yy+a+f+s+++ lpre++eri+vE+++l+r+iv
  RWW20094.1 268 QPGEALAINFNLHLHHMPDESVSTRNHRDRLLRMIKSASPKVVTLVEHEANTNTAPFFPRFLETLNYYTAIFESIDVCLPRENKERISVEQHCLARDIV 366
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++acegaer+er e ++kW++r+++aGF+p++ls  +++++k+ll++++ + y++ee++g l+lgWk+rpL++ SaWr
  RWW20094.1 367 NIIACEGAERVERYELFGKWSSRFMMAGFRPYHLSPLINATIKRLLHNYS-EHYQLEERDGVLYLGWKNRPLIVSSAWR 444
                 **************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MSQQDSVSDN ANGSPVSAAT EDPNDLKNKL REIEAAMLGP DLDTIGNSDS GYLGDVSLEP  60
EKWRGVMETP RGDLKQFLIA CARAVAENDL IAVEWLISEL KRMVSVFGEP IQRLGAYLLE  120
GLIARLASSG SSIYKASKCK EPASSDLLSY MHILYEVCPY FKFGYLSANG AIVEAVKGEN  180
MVHIIDFQIT QGSQWVTLIQ AFAAMPGGPP RIRITGIDDN VSAYARGGGL HIVGQRLSRL  240
AESCNVPFEF HSAAMSSCDV ELEHLDIQPG EALAINFNLH LHHMPDESVS TRNHRDRLLR  300
MIKSASPKVV TLVEHEANTN TAPFFPRFLE TLNYYTAIFE SIDVCLPREN KERISVEQHC  360
LARDIVNIIA CEGAERVERY ELFGKWSSRF MMAGFRPYHL SPLINATIKR LLHNYSEHYQ  420
LEERDGVLYL GWKNRPLIVS SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein