PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 366aa MW: 39811.5 Da PI: 7.9222 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl RWW19487.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ W++Ia++++ gRt++++k+ w++ RWW19487.1 67 RGTFSQQEEDLIIELHAVLGNR-WSKIAAHLP-GRTDNEIKNLWNS 110 899*******************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MGGHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEEDLIIE LHAVLGNRWS KIAAHLPGRT DNEIKNLWNS CIKKKLRQRG 120 IDPGTHKPLA EVDGGDDNTQ SNSGKNSEAS DLQILVTPHM AMQEPTPSVS AIEKSVDESA 180 TSKSSATPAR ELFLDQFLAN HESSSSCRSS NSMGYFPFAQ ASFAPDYGGG RTTSSALPIS 240 SNPLLWFSQT SRHLDVTNGD AMSAVVPSLS STILSTSMVP APSCAADDAL PNWYGGDCNS 300 SRRSSVEDSG RIVLQSTCSS DSGIFPWPEL TPDKDVQVQL GGLAGVGGRD GRSKRADEVA 360 APQWKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 8e-88 | MYB family protein |