PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW19341.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YA | ||||||||
Protein Properties | Length: 211aa MW: 23385.3 Da PI: 9.3733 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100.1 | 2.2e-31 | 55 | 111 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVN KQ+++Il+RRq+Rak+e+e+kl +k rkpylheSRh hA+rR+RgsgGrF RWW19341.1 55 DGPIYVNVKQFHGILRRRQARAKAERENKL-SKVRKPYLHESRHLHAMRRARGSGGRF 111 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MPSFPEHSGH VELELGHSMV YPNYPYGDQC YGLYATYGAQ SMHGRMLLPM TMTADGPIYV 60 NVKQFHGILR RRQARAKAER ENKLSKVRKP YLHESRHLHA MRRARGSGGR FLNTNKVKDS 120 APHHPTESPS SEIMKSDSGN LNSSSGGSSV LGSEATSVCT HKNHNNFHVI EHLRSSFFRP 180 LSSMIDGEQG TAGMSNQWVT AADGCCDLLK V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.3 | 2e-33 | NF-YA family protein |