PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW19126.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 120aa    MW: 13511.9 Da    PI: 10.1258
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW19126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF100.37.4e-3268118151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey++
  RWW19126.1  68 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYAT 118
                 79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
IFANRCLSLV TMLKHELTCL STLRPTATVC CAAVHGLTVL REETKSRKEA IHSLEPPAKM  60
GRGKIEIKRI ENTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALVVFSSR GRLYEYATSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.24e-39MIKC_MADS family protein