PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW18941.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GRF | ||||||||
Protein Properties | Length: 170aa MW: 18273.5 Da PI: 10.0183 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 76.5 | 2.7e-24 | 59 | 102 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 +epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ RWW18941.1 59 PEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVES 102 8****************************************986 PP | |||||||
2 | QLQ | 66.1 | 8.6e-23 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l+yKyL+a++PvPpeL+ +iq+ RWW18941.1 8 PFTVAQWQELEHQALIYKYLMAGVPVPPELVIPIQR 43 9*********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MGMGGQAPFT VAQWQELEHQ ALIYKYLMAG VPVPPELVIP IQRSFEALAG RYYHHPAHPE 60 PGRCRRTDGK KWRCSKDAHP DSKYCERHMH RGRNRSRKPV ESQSASQMQS SSSTVTSIAP 120 AGSGAGGNGG GSFQSIPQLS VAGRSNTQQS LCLGTSSSSQ LPLGPGPFGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-42 | GRF family protein |