PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18835.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 363aa MW: 39922.1 Da PI: 8.5973

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.1e-18	77	122	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W ++Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ RWW18835.1 77 RGHWRPDEDAKLKELVSQHGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 122 899***************************.*********996 PP
2	Myb_DNA-binding	57.8	2.5e-18	129	172	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++eE+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW18835.1 129 RDSFSEEEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 172 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MAPNELKLTG DMGFRPPVAP PFVTGSTQGE RECKRFQGLA EGHGSHGDRR SNREGKEEEA 60 GDGHVHGKER QHRPCARGHW RPDEDAKLKE LVSQHGPQNW NLIAEKLEGR SGKSCRLRWF 120 NQLDPRISRD SFSEEEEERL LAAHRLYGNK WALIARLFPG RTDNAVKNHW HVIMARKQRE 180 QSNAYRRRRP SSASSSISPL THSLPNRKEV NPSNNACSGE STITSTRDES ASTCADLSLG 240 SFTSGIVPSF PNGYSPSSHQ PHSVISVSYF YPGSDGKVVT TSTRIYEKHG GDSGGSFFSH 300 GVPRMLAPGF NQSDCTGTGS ASGASADEAV VYRMTNTLHH GETEHGGEKL RLPFFDFLGV 360 GAT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MAPNELKLTG DMGFRPPVAP PFVTGSTQGE RECKRFQGLA EGHGSHGDRR SNREGKEEEA  60
GDGHVHGKER QHRPCARGHW RPDEDAKLKE LVSQHGPQNW NLIAEKLEGR SGKSCRLRWF  120
NQLDPRISRD SFSEEEEERL LAAHRLYGNK WALIARLFPG RTDNAVKNHW HVIMARKQRE  180
QSNAYRRRRP SSASSSISPL THSLPNRKEV NPSNNACSGE STITSTRDES ASTCADLSLG  240
SFTSGIVPSF PNGYSPSSHQ PHSVISVSYF YPGSDGKVVT TSTRIYEKHG GDSGGSFFSH  300
GVPRMLAPGF NQSDCTGTGS ASGASADEAV VYRMTNTLHH GETEHGGEKL RLPFFDFLGV  360
GAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	190	YRRRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-61	MYB family protein