PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW18816.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GATA
Protein Properties Length: 288aa    MW: 30584.4 Da    PI: 7.1933
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW18816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.51.1e-19192226135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ +Tp+WR gp+g+ktLCnaCG++y++ +l
  RWW18816.1 192 CRHCGAEETPQWRAGPEGPKTLCNACGVRYKSGRL 226
                 *******************************9885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVETLEEAAA AGEACFADEL LLLDFTSNGY HPSLAAASSV PAAGAGELQH QALLLHDFFE  60
PSVDGLPVLL HPRQNPIFGL PAEGEGGGED EEEELEWLAN KDAFPALETS FEIPVPSQSR  120
SSSSGGGGVA AGAVGERPSP VSVLSAAASF SAPVRPRSKG RRRRRRVLAG LSPEPACITA  180
AGRATAVERR CCRHCGAEET PQWRAGPEGP KTLCNACGVR YKSGRLVPEY RPASSPTFSA  240
AVHSNSHRRI LEMRRQNVAG ELRRSTRAPP PTPSLKQNPS LLVNSFLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157166RSKGRRRRRR
2161166RRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-38GATA family protein