PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW18816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 288aa MW: 30584.4 Da PI: 7.1933 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.5 | 1.1e-19 | 192 | 226 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ +Tp+WR gp+g+ktLCnaCG++y++ +l RWW18816.1 192 CRHCGAEETPQWRAGPEGPKTLCNACGVRYKSGRL 226 *******************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MVETLEEAAA AGEACFADEL LLLDFTSNGY HPSLAAASSV PAAGAGELQH QALLLHDFFE 60 PSVDGLPVLL HPRQNPIFGL PAEGEGGGED EEEELEWLAN KDAFPALETS FEIPVPSQSR 120 SSSSGGGGVA AGAVGERPSP VSVLSAAASF SAPVRPRSKG RRRRRRVLAG LSPEPACITA 180 AGRATAVERR CCRHCGAEET PQWRAGPEGP KTLCNACGVR YKSGRLVPEY RPASSPTFSA 240 AVHSNSHRRI LEMRRQNVAG ELRRSTRAPP PTPSLKQNPS LLVNSFLH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 166 | RSKGRRRRRR |
2 | 161 | 166 | RRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 4e-38 | GATA family protein |