PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW18741.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family BBR-BPC
Protein Properties Length: 315aa    MW: 35517.5 Da    PI: 9.3445
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW18741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind310.84.5e-95131520301
   GAGA_bind  20 lkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla.....salpvgvqvlsgtksidslqq 113
                 +k++ +l+++++iaerd++i+er+la+sek aa+ae dma+++rd+a+a+r++a++erdn+++al ++++++      + + + ++    t++ ++  +
  RWW18741.1   1 MKDHPALKIIALIAERDSAIQERDLAISEKTAALAELDMALKERDAAFAKRDNAIMERDNAIAALRYAREKSYngyneQGCCSWCTPPLWTSHSHQDAH 99 
                 788999***********************************************************9988776667755333333332222222222211 PP

   GAGA_bind 114 lse......pqledsave.lreeeklealpieeaaeeakekkkkkk.rqrakkpkekkakkkkkksekskkkvkkesader.................. 186
                          pql+d +++ +r+++++ea+pi+  ++ ++++ k kk ++++++p ++  k+++k+++ + ++++k  ++ +                  
  RWW18741.1 100 --LdvhessPQLADAPYDhIRQMHITEAYPISMVPDYSEKEMKAKKiTSTQTTPHKRPLKSPRKSKKGHGDDSNKLVSRAKkhgklkgqeivggkkdln 196
                 ..1223477*********9**************998877766665515566666666666555544444444444443322357799************ PP

   GAGA_bind 187 ....skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                     +  ++ + +++ n+ s++e ++P+PvCsCtG+lrqCY+WG  GWqS+CCt ++S+yPLPv+++rr+aR++grKmS++af+klL  Laa+Gydls 
  RWW18741.1 197 efptMTDTWGNCNMGFNEFSVNELSVPAPVCSCTGKLRQCYRWGDFGWQSSCCTSSLSMYPLPVMPNRRHARMGGRKMSGSAFRKLLRCLAADGYDLSM 295
                 ***999********************************************************************************************* PP

   GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                  vDLk+hWAkHGtn+++tir
  RWW18741.1 296 TVDLKNHWAKHGTNRYITIR 315
                 *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MKDHPALKII ALIAERDSAI QERDLAISEK TAALAELDMA LKERDAAFAK RDNAIMERDN  60
AIAALRYARE KSYNGYNEQG CCSWCTPPLW TSHSHQDAHL DVHESSPQLA DAPYDHIRQM  120
HITEAYPISM VPDYSEKEMK AKKITSTQTT PHKRPLKSPR KSKKGHGDDS NKLVSRAKKH  180
GKLKGQEIVG GKKDLNEFPT MTDTWGNCNM GFNEFSVNEL SVPAPVCSCT GKLRQCYRWG  240
DFGWQSSCCT SSLSMYPLPV MPNRRHARMG GRKMSGSAFR KLLRCLAADG YDLSMTVDLK  300
NHWAKHGTNR YITIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.12e-81BBR-BPC family protein