PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW18595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 105aa MW: 12049 Da PI: 10.1202 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 24.6 | 3.4e-08 | 15 | 31 | 19 | 35 |
GATA 19 nktLCnaCGlyyrkkgl 35 + +LCnaCG++yrk ++ RWW18595.1 15 PMSLCNACGIRYRKSRR 31 667***********985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 105 aa Download sequence |
MEQMECDRRQ LWPDPMSLCN ACGIRYRKSR RAVPRFDEAG VKEKREVDGG GERFNVSFKL 60 LMLGSGLCKS TSMDRKQRRR RRSVLGEEEQ AAVLLMALSS GFLYA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 74 | 81 | DRKQRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49300.1 | 3e-17 | GATA family protein |