PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18581.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 425aa MW: 46402.8 Da PI: 7.147

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.2	5.1e-07	340	380	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P K++ a++L +A +Y+k L RWW18581.1 340 ARHRRERISERLRVLQRLVPGG-----SKMDTATMLDEAANYLKFL 380 599***************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDSFGWENPA AIRSEVFLSP SRCSNHYGDF TGSSEGYAAF NDKFALDEAL LSSGLELQGI 60 LDACQASSHL GRLSGTVGIS TPALGSMNNS LDLELLQYQE AMLMSAADSG LMRSVLDTTS 120 GDASCCQAYA SSSLTERTDV SHPVTENFGA CQEQRVISNV IDAQDGISTI FSSCKNVHGL 180 SCSGNISSGD SERHGYLYRS HHEDVASQGC SKSNTRQVES FQGRRSTKRK LVESTRAESN 240 HHICSLLEPN SSAKEGGLQI SFARGQKEKK LRSERHSESS TIEFVREGDY EPDDEAIAQV 300 KEMIYRAAAL RPVSLVAEGA AEKPKRKNVR ISSDPQTVAA RHRRERISER LRVLQRLVPG 360 GSKMDTATML DEAANYLKFL KSQVKALETL GNRFHPVNSS STTASFPLPL NRAFPMRSSL 420 LHPKP

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDSFGWENPA AIRSEVFLSP SRCSNHYGDF TGSSEGYAAF NDKFALDEAL LSSGLELQGI  60
LDACQASSHL GRLSGTVGIS TPALGSMNNS LDLELLQYQE AMLMSAADSG LMRSVLDTTS  120
GDASCCQAYA SSSLTERTDV SHPVTENFGA CQEQRVISNV IDAQDGISTI FSSCKNVHGL  180
SCSGNISSGD SERHGYLYRS HHEDVASQGC SKSNTRQVES FQGRRSTKRK LVESTRAESN  240
HHICSLLEPN SSAKEGGLQI SFARGQKEKK LRSERHSESS TIEFVREGDY EPDDEAIAQV  300
KEMIYRAAAL RPVSLVAEGA AEKPKRKNVR ISSDPQTVAA RHRRERISER LRVLQRLVPG  360
GSKMDTATML DEAANYLKFL KSQVKALETL GNRFHPVNSS STTASFPLPL NRAFPMRSSL  420
LHPKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	230	RRSTKRK
2	224	231	RRSTKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	6e-47	bHLH family protein