PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18517.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 366aa MW: 39463.1 Da PI: 7.407

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++ Ede l ++v+++G+++W+ I++ ++ gR++k+c++rw + RWW18517.1 20 KGPWSPAEDEALQRLVQRHGPRNWSIISKSIP-GRSGKSCRLRWCNQ 65 79****************************.*********985 PP
2	Myb_DNA-binding	56.1	8.8e-18	74	116	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEde++v+a++++G++ W+tIar + gRt++ +k++w++ RWW18517.1 74 PFTDEEDEIIVRAHRRFGNK-WATIARLLS-GRTDNAIKNHWNST 116 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MAATTATAGG SRSKEADRIK GPWSPAEDEA LQRLVQRHGP RNWSIISKSI PGRSGKSCRL 60 RWCNQLSPQV EHRPFTDEED EIIVRAHRRF GNKWATIARL LSGRTDNAIK NHWNSTLKRK 120 HNRPCAGEDG LQHHYDAVMS AKAADIEDEA EAEATRPLKR ASSDGLILLS GGSGLCLSPG 180 SPSGSDLSDS SHHSHPVMPP PHSYQPVPTT GRIVPCSSPI HQHTQGEPIS AAVAPTFLNN 240 DDDPATSLTL SLPGSCQMST SKDHQVQTIF KSSHQSQLSC SVAAAPQQMM PRGFSSAATS 300 AEEGRRPAPS PFSAEFLAIM QEMIRDEVRS YMAGLEQSRM MCGVQPPSES AGNAAAVKPI 360 GVTDLE

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MAATTATAGG SRSKEADRIK GPWSPAEDEA LQRLVQRHGP RNWSIISKSI PGRSGKSCRL  60
RWCNQLSPQV EHRPFTDEED EIIVRAHRRF GNKWATIARL LSGRTDNAIK NHWNSTLKRK  120
HNRPCAGEDG LQHHYDAVMS AKAADIEDEA EAEATRPLKR ASSDGLILLS GGSGLCLSPG  180
SPSGSDLSDS SHHSHPVMPP PHSYQPVPTT GRIVPCSSPI HQHTQGEPIS AAVAPTFLNN  240
DDDPATSLTL SLPGSCQMST SKDHQVQTIF KSSHQSQLSC SVAAAPQQMM PRGFSSAATS  300
AEEGRRPAPS PFSAEFLAIM QEMIRDEVRS YMAGLEQSRM MCGVQPPSES AGNAAAVKPI  360
GVTDLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	1e-64	MYB family protein