PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18402.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WRKY

Protein Properties

Length: 504aa MW: 53877.6 Da PI: 7.0069

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.6	2.5e-28	166	221	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D ynWrKYGqK+vk+s+++rsYYrCt ++C++kkkve++ d++vve++Y+g+Hnh+ RWW18402.1 166 DVYNWRKYGQKQVKSSDNARSYYRCTDSSCSAKKKVEHCP-DGTVVEVIYRGKHNHD 221 99************************************.*************7 PP
2	WRKY	104.4	6e-33	337	394	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYYrCt++gCpv+k+ver ++d k++ itYegeHnhe RWW18402.1 337 SDGYKWRKYGQKMVKGNHNPRSYYRCTHSGCPVRKHVERVSHDAKALLITYEGEHNHE 394 7********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MAEEKASLAR ENATGTGSPP ASSSSVAEEH SLDDRVAAVA GGGPEASPSP ANVDGRSFSQ 60 LLAGAMASPA ASPRPAPIVT VPVVAVPCFL TPTALVESQG FSGQFAMTHQ AVLATVTAQA 120 QMQAQAACPS SSNSVTNSFP QPMLSTVSPM PLQQLPPQTP KKTPGDVYNW RKYGQKQVKS 180 SDNARSYYRC TDSSCSAKKK VEHCPDGTVV EVIYRGKHNH DPPQKHRYTR DRGAQSSGPP 240 VENESLDNPS TEPDESDPST CKAAQNSINE TPKQQLYCSS DCEFDAGTKS EEDIAEEPDP 300 KRRQVAKLSE NSKSSSAPIK TIREYIVQTE IDVRHLSDGY KWRKYGQKMV KGNHNPRSYY 360 RCTHSGCPVR KHVERVSHDA KALLITYEGE HNHEQPTSKH GSDPPLTTSQ SNVAAGMSSE 420 QLSTSNSLSV EKSSKESCQN IVVEEVAGDK KLELGGDGAL ESAQALLSIG FSSSASEGTT 480 RNSSGSMKSP ILTKNRAAAS VQNT

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MAEEKASLAR ENATGTGSPP ASSSSVAEEH SLDDRVAAVA GGGPEASPSP ANVDGRSFSQ  60
LLAGAMASPA ASPRPAPIVT VPVVAVPCFL TPTALVESQG FSGQFAMTHQ AVLATVTAQA  120
QMQAQAACPS SSNSVTNSFP QPMLSTVSPM PLQQLPPQTP KKTPGDVYNW RKYGQKQVKS  180
SDNARSYYRC TDSSCSAKKK VEHCPDGTVV EVIYRGKHNH DPPQKHRYTR DRGAQSSGPP  240
VENESLDNPS TEPDESDPST CKAAQNSINE TPKQQLYCSS DCEFDAGTKS EEDIAEEPDP  300
KRRQVAKLSE NSKSSSAPIK TIREYIVQTE IDVRHLSDGY KWRKYGQKMV KGNHNPRSYY  360
RCTHSGCPVR KHVERVSHDA KALLITYEGE HNHEQPTSKH GSDPPLTTSQ SNVAAGMSSE  420
QLSTSNSLSV EKSSKESCQN IVVEEVAGDK KLELGGDGAL ESAQALLSIG FSSSASEGTT  480
RNSSGSMKSP ILTKNRAAAS VQNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-63	WRKY family protein