PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18331.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 411aa MW: 45436.8 Da PI: 9.6945

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.2e-10	215	259	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N+ f+ Lr llP+ K +Ka++L + +Y+ sL RWW18331.1 215 HMISERRRREKLNQNFHALRLLLPPG-----SKKDKASVLANTKNYLDSL 259 8899******************95.....599**********9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
RFDTLHPWIP SFSLPQKPEV GSSKSPVASS AALTSAHGLP MSTIRQPSMS FVRLQMDVQM 60 DIRQVFGEEF IRQSQLQSGE QSWRSSSSSS SLRSPSAGSP EGSSLLLTKA GAAAFMPDVV 120 LPHQMAMQTY NLTSLPPSSS SSPLMYQQLV LERRHHPGGA FQGYHPTGAV RVEATPNVAG 180 QRMIKKGIDV LRRISTAMME APTQEHRPTS DQLHHMISER RRREKLNQNF HALRLLLPPG 240 SKKDKASVLA NTKNYLDSLK ARVSELQERN QMLELQLPPT DAAAAAAADG VSDSDERVRV 300 EISRSGADDP NPSESQQINL RLVVRDEECD MTDLVVRTLE CLKGMSRDVM LASVAASTMS 360 PRKYTCARFN LKLREKVMGV EYVFSILISA QMRPVYPSSS VVKAEQLTHD K

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

RFDTLHPWIP SFSLPQKPEV GSSKSPVASS AALTSAHGLP MSTIRQPSMS FVRLQMDVQM  60
DIRQVFGEEF IRQSQLQSGE QSWRSSSSSS SLRSPSAGSP EGSSLLLTKA GAAAFMPDVV  120
LPHQMAMQTY NLTSLPPSSS SSPLMYQQLV LERRHHPGGA FQGYHPTGAV RVEATPNVAG  180
QRMIKKGIDV LRRISTAMME APTQEHRPTS DQLHHMISER RRREKLNQNF HALRLLLPPG  240
SKKDKASVLA NTKNYLDSLK ARVSELQERN QMLELQLPPT DAAAAAAADG VSDSDERVRV  300
EISRSGADDP NPSESQQINL RLVVRDEECD MTDLVVRTLE CLKGMSRDVM LASVAASTMS  360
PRKYTCARFN LKLREKVMGV EYVFSILISA QMRPVYPSSS VVKAEQLTHD K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	224	ERRRRE
2	220	225	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-25	bHLH family protein