PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18244.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 382aa MW: 41837.2 Da PI: 4.9809

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.1	5.4e-10	232	256	23	48
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Iar+++ gRt++++k++w++++ RWW18244.1 232 RWSRIARKLP-GRTDNEIKNYWRTHM 256 7*******.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MWRKDKWAAH PPLELLPLNH PGTASSSSTT CRLVRPLAAL VRIRHTPESL PLASNKEEDK 60 WQILAGSTRP ANTRLLPQLF GTESTPPPGD GEFLPRPHWN PNICYRPLHA TVVVLQTENA 120 IPGGWILNYE ASPTQPPLYS DIAISRAVLV LDRSPSSDIT RPRRAGHGPI NATAVAAAAV 180 HQEEEGEDEQ DGDAASSSSS TLTGATGLLP ASPESFLSVH HARPRDISFA RRWSRIARKL 240 PGRTDNEIKN YWRTHMRKKA QERKRKASPS SSSSSSSWLT DNSAAPGKPA SEDAPGGGQE 300 LNCSGTTTAL GGIGDDDDDD DDDALNGCYS MDEIWDEISE LSFQEREDER VSCPPVPSPV 360 WEHFSYSPWK MEDDEDLGFQ AP

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MWRKDKWAAH PPLELLPLNH PGTASSSSTT CRLVRPLAAL VRIRHTPESL PLASNKEEDK  60
WQILAGSTRP ANTRLLPQLF GTESTPPPGD GEFLPRPHWN PNICYRPLHA TVVVLQTENA  120
IPGGWILNYE ASPTQPPLYS DIAISRAVLV LDRSPSSDIT RPRRAGHGPI NATAVAAAAV  180
HQEEEGEDEQ DGDAASSSSS TLTGATGLLP ASPESFLSVH HARPRDISFA RRWSRIARKL  240
PGRTDNEIKN YWRTHMRKKA QERKRKASPS SSSSSSSWLT DNSAAPGKPA SEDAPGGGQE  300
LNCSGTTTAL GGIGDDDDDD DDDALNGCYS MDEIWDEISE LSFQEREDER VSCPPVPSPV  360
WEHFSYSPWK MEDDEDLGFQ AP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.1	1e-20	MYB_related family protein