PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW18125.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 685aa MW: 73567 Da PI: 9.9519

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW18125.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.4	4.4e-10	13	45	4	37
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtl 37 W t+E++ll++av+++G+++W+++a ++ Rt RWW18125.1 13 WGTWEELLLACAVNRHGTRRWESVAMEIE-SRTS 45 *****************************.6664 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MARSGDTEEK EIWGTWEELL LACAVNRHGT RRWESVAMEI ESRTSVSQLV TPQGCRQRYR 60 DLQRRFGAGA GVVNGSGDDD GGDADPDSEA DVPWLEELRR LRVAELRREV ERYDISIGSL 120 QLKVKSLQEE RERSLREAES DEEKPDHETK KEGAPPGSTP ESLAGNRISS GGDSGPSCDQ 180 SHSNDPKEIP GEDYREQGKA SALVAPGGNA ADPSAVADEK AGEGSYNGST GSPTVGAAAR 240 KQAMGDSGES IAESKRGEEG EGEKESSDVQ SSASLSLRWR KAAFIGGSGR GEEAAAESRP 300 LVDLLEIFRS DKYGSVFERR LESQVCDLFN FQFSRLFKSI TYRSLVRQHV DVEMVRAKLD 360 RIASGRSYST AEFFRDLLLL CSNAVVFFPR DSLESVAAVH LRRLVTKELD ATFRTPKEPT 420 PPPPPQPKPA DPKPKPELDL AGALIDKTIS SPPPIVSRKR SSISNKVTVA AAKKKEEEKP 480 DPARKESDNE EKSLTTKERT VLSGPTRGLR TSKVRGGKGE GGLAAKRSNL APTPGLKSKP 540 VDNVAAVEAV VKPDKKNSGG GPATAAAKKQ SATSFLNRMK RSSNGTLMEM LKSSSGAGGG 600 REQKKEAKGD ARKDQGSRQA AGGGSDSGKK VAEASGGSGK RGVGRPPKRA AAYVTPPPAK 660 RAREEAETAA PSKTPASTSR KRRRR

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MARSGDTEEK EIWGTWEELL LACAVNRHGT RRWESVAMEI ESRTSVSQLV TPQGCRQRYR  60
DLQRRFGAGA GVVNGSGDDD GGDADPDSEA DVPWLEELRR LRVAELRREV ERYDISIGSL  120
QLKVKSLQEE RERSLREAES DEEKPDHETK KEGAPPGSTP ESLAGNRISS GGDSGPSCDQ  180
SHSNDPKEIP GEDYREQGKA SALVAPGGNA ADPSAVADEK AGEGSYNGST GSPTVGAAAR  240
KQAMGDSGES IAESKRGEEG EGEKESSDVQ SSASLSLRWR KAAFIGGSGR GEEAAAESRP  300
LVDLLEIFRS DKYGSVFERR LESQVCDLFN FQFSRLFKSI TYRSLVRQHV DVEMVRAKLD  360
RIASGRSYST AEFFRDLLLL CSNAVVFFPR DSLESVAAVH LRRLVTKELD ATFRTPKEPT  420
PPPPPQPKPA DPKPKPELDL AGALIDKTIS SPPPIVSRKR SSISNKVTVA AAKKKEEEKP  480
DPARKESDNE EKSLTTKERT VLSGPTRGLR TSKVRGGKGE GGLAAKRSNL APTPGLKSKP  540
VDNVAAVEAV VKPDKKNSGG GPATAAAKKQ SATSFLNRMK RSSNGTLMEM LKSSSGAGGG  600
REQKKEAKGD ARKDQGSRQA AGGGSDSGKK VAEASGGSGK RGVGRPPKRA AAYVTPPPAK  660
RAREEAETAA PSKTPASTSR KRRRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	680	684	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	6e-22	MYB_related family protein