PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17749.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 409aa MW: 44513.6 Da PI: 5.5869

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.4e-10	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++l+ +++++G g+W++ +++ g RWW17749.1 14 KGPWTPEEDQKLLAYIEKHGHGSWRALPAKAG 45 79************************999887 PP
2	Myb_DNA-binding	25.4	3.4e-08	121	144	24	48
HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48 W++Ia +++ +Rt++++k++w+++l RWW17749.1 121 WSAIATHLP-KRTDNEIKNFWNTHL 144 *******.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE KHGHGSWRAL PAKAGEPPEQ SIYRQRRRDC 60 VEVDGRERLV ILLLLGNCRT AEVWEELQVE VDQLPSAGHQ EGGVQPAGGA DHHPTPCSPW 120 WSAIATHLPK RTDNEIKNFW NTHLKKRLAK MGIDPCTHKA MIDALSSGNG HPKKVSNLSH 180 MAQWENARLE AEARLARESK LRAASNSTIL PQQQQQQHMG TSSSSSPTTP LPPAPLAPWR 240 EAWSAKPATQ GERIDLESPT STLSLAENWL PIMASGTELV DGNAAAAAAA THQGGENLEP 300 EGTGWKCVAK DRVDCFTGFS MEALGSEAPW LSEPYTWQAG CSWGQLGAGF TAMLLGDSGG 360 QNTSDSCVQE EEEEATGLVE PEGNKTYWNT ILNSVNSSSS SNSPPVFYH

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE KHGHGSWRAL PAKAGEPPEQ SIYRQRRRDC  60
VEVDGRERLV ILLLLGNCRT AEVWEELQVE VDQLPSAGHQ EGGVQPAGGA DHHPTPCSPW  120
WSAIATHLPK RTDNEIKNFW NTHLKKRLAK MGIDPCTHKA MIDALSSGNG HPKKVSNLSH  180
MAQWENARLE AEARLARESK LRAASNSTIL PQQQQQQHMG TSSSSSPTTP LPPAPLAPWR  240
EAWSAKPATQ GERIDLESPT STLSLAENWL PIMASGTELV DGNAAAAAAA THQGGENLEP  300
EGTGWKCVAK DRVDCFTGFS MEALGSEAPW LSEPYTWQAG CSWGQLGAGF TAMLLGDSGG  360
QNTSDSCVQE EEEEATGLVE PEGNKTYWNT ILNSVNSSSS SNSPPVFYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-47	MYB family protein