PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17702.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 276aa MW: 31095.2 Da PI: 9.8252

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.2e-09	58	93	1	37
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 rg W + Ed +l ++v+++G+ +W+ Ia +++ gR++ RWW17702.1 58 RGHWKPLEDAKLRELVARYGPQNWNFIADKLN-GRSG 93 899***************************.97 PP
2	Myb_DNA-binding	49.3	1.1e-15	114	157	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eE+e+lv ++ +G++ W++Iar ++ gRt++ +k+ w+ + RWW17702.1 114 TAFSEEEEEKLVASHRIYGNK-WALIARLFP-GRTDNAVKNQWHVL 157 689****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
RGHQLQKSAA EMRLFSAPPA PPPRSRKGLP DIVAQSERDE RGMSSGRRDH GQPKLCVRGH 60 WKPLEDAKLR ELVARYGPQN WNFIADKLNG RSGDLMLLVL LRWFNQLDPK INKTAFSEEE 120 EEKLVASHRI YGNKWALIAR LFPGRTDNAV KNQWHVLMAR KEREQCSGCR MRKALPQRTE 180 VSSGHNHAWS GESSITSSRD ESSSTSTGNR AMPCFSKDFG MAQQQQPLQL CFGVFGNETS 240 ERSAVDHCSN GFLPSETDGD RKKKCIPFID FMGVGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-57	MYB family protein