PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW17645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 147aa MW: 16943.4 Da PI: 9.518 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 101.5 | 3.2e-32 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ RWW17645.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 14.4 | 1.5e-06 | 90 | 118 | 9 | 37 |
K-box 9 leeakaeslqqelakLkkeienLqreqRh 37 + ea+ s++qe++kL + e+Lqr+qR RWW17645.1 90 NGEAQVCSWYQEMSKLTVKFESLQRSQRL 118 6788899*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSW 60 ITLTLSCRTS KTLERYQRCC YTPQDPNVAN GEAQVCSWYQ EMSKLTVKFE SLQRSQRLLS 120 FSVIFAVLEH LHSVNDGQDG RTPEESK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 3e-42 | MIKC_MADS family protein |