PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17496.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 456aa MW: 50535.7 Da PI: 6.2068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9.3e-09	3	38	1	36
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRt 36 rg WT+eEd++lv+ + G ++W+++++ g++Rt RWW17496.1 3 RGTWTAEEDQKLVNFIINNGVHCWRLVPKLAGTNRT 38 89******************************9998 PP
2	Myb_DNA-binding	29	2.5e-09	75	97	23	46
-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46 +W++Ia++++ gRt++++k++w++ RWW17496.1 75 RWSKIASYFP-GRTDNEIKNHWNT 97 5*******.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MRRGTWTAEE DQKLVNFIIN NGVHCWRLVP KLAGTNRTFS DARTVLEVMI SYGNLDLTHA 60 LLLLLRLVNF AFPLRWSKIA SYFPGRTDNE IKNHWNTRIK KRLNLPGLNP PATHELIDPP 120 NANNPETIGM KPKEEDKISG FDRPIWMPFE ITNAGEIRLQ VNSSGSCSSS SAQHSLCASS 180 SFPSSETTIS LDDLFFYGNL LARKEKHVAA LGGSISFGRF LSESLDWGKW SSFHHNRYLE 240 EVERYSVPGS VARKKAYFEA HYKRVAAKKE AANAANKSFP ERQTDVAGFV ESEKKSNRTV 300 DQGACLSRAG ISFDLCEVAE AEKGKAIEED KIHIGSSLQL EATDVAVEEG EQAESEEKSN 360 HKVDNSRKGT SFDLCGKSNE PQVAEAEKGN AIEGDEIHIG SSLQLEPTDV AVEDIENKNK 420 SSGFELSEIC TSEKKPLKVM CLASSSVSVS YLCQCH

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MRRGTWTAEE DQKLVNFIIN NGVHCWRLVP KLAGTNRTFS DARTVLEVMI SYGNLDLTHA  60
LLLLLRLVNF AFPLRWSKIA SYFPGRTDNE IKNHWNTRIK KRLNLPGLNP PATHELIDPP  120
NANNPETIGM KPKEEDKISG FDRPIWMPFE ITNAGEIRLQ VNSSGSCSSS SAQHSLCASS  180
SFPSSETTIS LDDLFFYGNL LARKEKHVAA LGGSISFGRF LSESLDWGKW SSFHHNRYLE  240
EVERYSVPGS VARKKAYFEA HYKRVAAKKE AANAANKSFP ERQTDVAGFV ESEKKSNRTV  300
DQGACLSRAG ISFDLCEVAE AEKGKAIEED KIHIGSSLQL EATDVAVEEG EQAESEEKSN  360
HKVDNSRKGT SFDLCGKSNE PQVAEAEKGN AIEGDEIHIG SSLQLEPTDV AVEDIENKNK  420
SSGFELSEIC TSEKKPLKVM CLASSSVSVS YLCQCH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	6e-29	MYB family protein