PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW17172.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

FAR1

Protein Properties

Length: 442aa MW: 50476.6 Da PI: 8.689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW17172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	32.8	9.5e-11	1	24	12	35
GATA 12 WRrgpdgnktLCnaCGlyyrkkgl 35 +R+gp+g +tLCnaCG+ +rk ++ RWW17172.1 1 MRSGPEGRRTLCNACGIAWRKGKQ 24 59*******************987 PP
2	FAR1	82.4	7.6e-26	58	143	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA ++GFsvrk ks ++ + +rt+vCs+eg+r+++k + ++ +++r+etr+gC a+l++k++ +g+++vt+++ +HnH+ RWW17172.1 58 EFYNRYAGMIGFSVRKGWIDKS-SDKITRSRTLVCSREGFRKDKKGA-KEVKKPRPETRIGCPARLTIKLRPSGTYRVTEFVPDHNHQ 143 6*****************99.777799**********9999.999**********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MRSGPEGRRT LCNACGIAWR KGKQRKVIDY EVPMKDLVNT KMVPEVDMEF ENEDKAYEFY 60 NRYAGMIGFS VRKGWIDKSS DKITRSRTLV CSREGFRKDK KGAKEVKKPR PETRIGCPAR 120 LTIKLRPSGT YRVTEFVPDH NHQPAPPSAM HMLRSQRVLT EVQAAEADLS DDSGTTPKSG 180 QTMLEKYDLR NNEWLANLFG DRENWALAYG RETLCADIKS TLQNENFSLL KKYLTPQLDL 240 LSFFKHYTRV VEDHRYAELQ ADFHASQSVP RIPPSKMLRQ AASLYTPAVF QMFHKEFEVF 300 MDCMLFSSGE VGTISEYRIT VGDNPKEYFV RLDSTDCSVA CSCKKFEFVG VHCGHVLKVL 360 DVRNVKELPE RYFLKRWRRD AKTDTESDPG GVTVDGDPKS PVTTLMHAPF SSYAHHLGSR 420 AITQFNEVIN ASTCLGYLIN VQ

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MRSGPEGRRT LCNACGIAWR KGKQRKVIDY EVPMKDLVNT KMVPEVDMEF ENEDKAYEFY  60
NRYAGMIGFS VRKGWIDKSS DKITRSRTLV CSREGFRKDK KGAKEVKKPR PETRIGCPAR  120
LTIKLRPSGT YRVTEFVPDH NHQPAPPSAM HMLRSQRVLT EVQAAEADLS DDSGTTPKSG  180
QTMLEKYDLR NNEWLANLFG DRENWALAYG RETLCADIKS TLQNENFSLL KKYLTPQLDL  240
LSFFKHYTRV VEDHRYAELQ ADFHASQSVP RIPPSKMLRQ AASLYTPAVF QMFHKEFEVF  300
MDCMLFSSGE VGTISEYRIT VGDNPKEYFV RLDSTDCSVA CSCKKFEFVG VHCGHVLKVL  360
DVRNVKELPE RYFLKRWRRD AKTDTESDPG GVTVDGDPKS PVTTLMHAPF SSYAHHLGSR  420
AITQFNEVIN ASTCLGYLIN VQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-34	FAR1 family protein