PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16973.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 590aa MW: 64771.6 Da PI: 6.5263

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	436	482	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N +f Lr ++P+ + K++Ka+ L A+ YI +Lq RWW16973.1 436 NHVEAERQRREKLNRRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 482 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MSEFSWSEEE RRMAATVLGP EAFGYLAASR ASSDGLTAAA FSSSAEADLQ RRLLDLVEGP 60 RDRPGLGWNY AIFWQISRAK SGDLVLGWGD GSCRDPRDGE EAAAAAAAAA VRSGGDDEPR 120 QKMRMAVLQK LHVFFGGSDE DNYALRLDQV TDAEVFFLVS MYFSFPRGKG APGRALAAGK 180 HLWILSPSDY CYRGFLAASA GFRTIVVVPF ETGVLELGSV RSLAESPDAL QMIKSVFLGT 240 IHAQLPRSNE KNDRNGPEAC TKIFGKDLNL GTPNVDDKIL VTKVEDNSWD TQPKSGSTSW 300 MLFPNVRKGM QSFSWNHVRG LNSHQQQFGN GLMMAANEAV NHSNGVRGDP SLGQFQIQTN 360 QHKPQQSLQP PPRHIDFSVG GTSKAAGALI AQIGALEGDH ADVDASSKDK NSSPQDERRP 420 RKRGRKPANG REEPLNHVEA ERQRREKLNR RFYALRAVVP NISKMDKASL LGDAIAYITD 480 LQKRLKEMES EREMFSESSM VDPSTQVCRP EFDVQAQRDE VIVQVSSPLN THPVSKVFQA 540 LKEAEIDVAE SKVSGGEDTI QHTFIIKSPG SEQQTKDKIV AALSYETNST

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MSEFSWSEEE RRMAATVLGP EAFGYLAASR ASSDGLTAAA FSSSAEADLQ RRLLDLVEGP  60
RDRPGLGWNY AIFWQISRAK SGDLVLGWGD GSCRDPRDGE EAAAAAAAAA VRSGGDDEPR  120
QKMRMAVLQK LHVFFGGSDE DNYALRLDQV TDAEVFFLVS MYFSFPRGKG APGRALAAGK  180
HLWILSPSDY CYRGFLAASA GFRTIVVVPF ETGVLELGSV RSLAESPDAL QMIKSVFLGT  240
IHAQLPRSNE KNDRNGPEAC TKIFGKDLNL GTPNVDDKIL VTKVEDNSWD TQPKSGSTSW  300
MLFPNVRKGM QSFSWNHVRG LNSHQQQFGN GLMMAANEAV NHSNGVRGDP SLGQFQIQTN  360
QHKPQQSLQP PPRHIDFSVG GTSKAAGALI AQIGALEGDH ADVDASSKDK NSSPQDERRP  420
RKRGRKPANG REEPLNHVEA ERQRREKLNR RFYALRAVVP NISKMDKASL LGDAIAYITD  480
LQKRLKEMES EREMFSESSM VDPSTQVCRP EFDVQAQRDE VIVQVSSPLN THPVSKVFQA  540
LKEAEIDVAE SKVSGGEDTI QHTFIIKSPG SEQQTKDKIV AALSYETNST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	418	426	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-133	bHLH family protein