PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16811.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 454aa MW: 51500.1 Da PI: 9.68

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.9	2.4e-08	5	33	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 rg+WT eEd+ll+++++ +G g+W++ ar RWW16811.1 5 RGPWTLEEDKLLIHYIACHGEGRWNLLAR 33 89************************998 PP
2	Myb_DNA-binding	52.6	1.1e-16	44	87	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE++l++++++++G++ W++Ia++++ gRt++++k++w++ RWW16811.1 44 RGNLSPEEQLLILELHAKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 87 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MELRRGPWTL EEDKLLIHYI ACHGEGRWNL LARWLNYLKP DVKRGNLSPE EQLLILELHA 60 KWGNRWSRIA QHLPGRTDNE IKNYWRTRVQ KQARQLKVDA NSAMFRDAVR CYWMPRLLAN 120 MDTSHTTQSQ DANTNAGTPE AHCWDSLTSS SCSTALPQLA DHTSELPSRP PAELDAVTFN 180 PFAAGCSMSD AYDLDTGWDL SPASAPTYPA VDCAVSNNDC IRNIGDGLWS MDELYEMLKS 240 YMSGAAAPEV PLGGGKKCDG GRKLQQGRGG GAGLECFLAK PHCEERRRRW RFHKLCTACM 300 HMPASDHIKL SPSDRPVKGL ISRDGPQPSW MVHGPAPRRR TVDWTDWGQL NHRWKSSGRR 360 VSLLDFTRRW AYVSGGVSFA PDSLQGWVSQ LRSRSRTRWS KSGDRSSIAR GSRDRRLVAF 420 PPPVDSKGPH EHDAEKRERE RTRARCHSFR AQRH

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MELRRGPWTL EEDKLLIHYI ACHGEGRWNL LARWLNYLKP DVKRGNLSPE EQLLILELHA  60
KWGNRWSRIA QHLPGRTDNE IKNYWRTRVQ KQARQLKVDA NSAMFRDAVR CYWMPRLLAN  120
MDTSHTTQSQ DANTNAGTPE AHCWDSLTSS SCSTALPQLA DHTSELPSRP PAELDAVTFN  180
PFAAGCSMSD AYDLDTGWDL SPASAPTYPA VDCAVSNNDC IRNIGDGLWS MDELYEMLKS  240
YMSGAAAPEV PLGGGKKCDG GRKLQQGRGG GAGLECFLAK PHCEERRRRW RFHKLCTACM  300
HMPASDHIKL SPSDRPVKGL ISRDGPQPSW MVHGPAPRRR TVDWTDWGQL NHRWKSSGRR  360
VSLLDFTRRW AYVSGGVSFA PDSLQGWVSQ LRSRSRTRWS KSGDRSSIAR GSRDRRLVAF  420
PPPVDSKGPH EHDAEKRERE RTRARCHSFR AQRH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	285	290	ERRRRW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25340.2	7e-62	MYB family protein