PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16762.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family RAV
Protein Properties Length: 337aa    MW: 37828.7 Da    PI: 10.5647
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.41.7e-1356104155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+ykGV   + +grW A+I+d      ++r++lg+f  +++Aa+a++ a+++++g
  RWW16762.1  56 SRYKGVVPQP-NGRWGAQIYDK-----HQRVWLGTFNEEDDAARAYDVAAQRFRG 104
                 78****9888.8*********3.....5**********99*************98 PP
2B396.91.3e-30183282194
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+ tpsdv+k++rlv+pk++ae+h      g    + + l +e   g++W+++++y+++s++yvltkGW++Fvk+ gL++gD+v+F+++   e++l+
  RWW16762.1 183 FDKAVTPSDVGKLNRLVIPKQHAEKHfplpqtGAAASKAVLLNFEGACGKVWRFRYSYWNSSQSYVLTKGWRRFVKEEGLRAGDVVTFHRSTGPEGQLF 281
                 89*************************9999866666888899999999****************************************8766666565 PP

                 E CS
          B3  94 v 94 
                 +
  RWW16762.1 282 I 282
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
METSSVEDEW SEVERRASPP RPPPLPATEG LQRLGSGASV VLDPEVGAES RKLPSSRYKG  60
VVPQPNGRWG AQIYDKHQRV WLGTFNEEDD AARAYDVAAQ RFRGRDAVTN FKPLVETDDV  120
DAAELSFLVS RSKAEIVDML RKHTYRDEMR QSRRSSGADG RRTYPSRGGS VGWFGGPHRE  180
HLFDKAVTPS DVGKLNRLVI PKQHAEKHFP LPQTGAAASK AVLLNFEGAC GKVWRFRYSY  240
WNSSQSYVLT KGWRRFVKEE GLRAGDVVTF HRSTGPEGQL FIGRKTRPAV KVVRLFGVNI  300
ADASGVVGRN AKRRTCRDME STMSSRELLK RRCREGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.11e-127RAV family protein