PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW16660.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C3H | ||||||||
Protein Properties | Length: 211aa MW: 23323.8 Da PI: 4.3179 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 29.6 | 1.2e-09 | 31 | 56 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 +++ C +++rtGtC +Gd C+++H++ RWW16660.1 31 GRPDCAYYMRTGTCGFGDGCRYNHPR 56 589*********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MFSFWCCVVA GSMWKMELGS EEPPAYPERH GRPDCAYYMR TGTCGFGDGC RYNHPRDRRM 60 STIAPSHQQY PVITSWEVAR SSMLPPSYMQ GPYGPMLLFP GIMPDPGWST FPVTPSPPMS 120 TGGEQNTVLE ESQYDSAAQT SRLHPAHSKS YPMAVSDWNS ESERNEDFEW DSDDEATTGD 180 DAPSSDPPAC PPGEVVLSSP WRSGPSNLAL I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47850.2 | 2e-20 | C3H family protein |