PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16314.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 294aa    MW: 30828 Da    PI: 9.3385
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.61.4e-40931931100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l+
  RWW16314.1  93 PCGACKFLRRKCVTGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQ 191
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  RWW16314.1 192 AH 193
                 86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MTCDAEAEED GLPRGRRRGV LHLLPRHGAL ARHEPDGAAM RRYQLKRGKR RRRQSGDMSG  60
KSPSVGVVGG GSGGGGGGGS SGGGGSAGGG TGPCGACKFL RRKCVTGCIF APYFDSEQGA  120
AHFAAVHKVF GASNVSKLLL HIPAHKRLDA VVTICYEAQA RLRDPVYGCV AHIFALQQQV  180
VNLQAELSYL QAHLATLELP SPPPPPPPPS LVASMPFSIS DLPSAASLPS TVDLSALFDP  240
LVQPSWPLQQ QQLSTSTRNL SESSGFGGGD LQALARELLD RQRTATSEPP PVSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14551LKRGKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.11e-73LBD family protein