PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW16191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 20255.5 Da PI: 9.9548 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.4e-17 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr +k +grWvAeIr+p +kr r++lg++ ta Aa+a++ a +l+g RWW16191.1 38 PYRGVRMRK-WGRWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVYYLRG 87 59*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MEGQCCSTST SEDTRKPPPT AVGRRAAASG GGGSRERPYR GVRMRKWGRW VAEIREPNKR 60 SRIWLGSYST AVAAARAYDT AVYYLRGRSA RLNFPDEILA EDVDGEGCGV SGVASMSAAS 120 IRKKATEVGA RVDALQTGLM SRPSPHQRQQ KGHHQHPLEQ QQLPSRPAKN PDLNQEPSPE 180 DSDKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23340.1 | 1e-28 | ERF family protein |