PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16107.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 352aa    MW: 39383 Da    PI: 6.497
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.99.5e-40103201199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 aCaaCk++rrkC++dC lapyfpa+q++kf n+h+lFG+sn++k++++l++ +r++ams+++y++++ra+dPv G+++ i++l++q+++ ++el l+ +
  RWW16107.1 103 ACAACKYQRRKCKPDCLLAPYFPANQQQKFLNAHRLFGVSNIVKIIRDLDPFQRNEAMSTIIYQSDMRAHDPVGGCYRYIRDLERQIDHDNTELTLVLR 201
                 7******************************************************************************************99988755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MGSLCCPPPR HPPRPTSLPT DPIVAKNRRT NNHQSNNNQN ILLLLFLLFL LLRVVGECAT  60
FNALPLDPIM TSATTSNTTA TNTSASSSSN NKSSSSQPAA NSACAACKYQ RRKCKPDCLL  120
APYFPANQQQ KFLNAHRLFG VSNIVKIIRD LDPFQRNEAM STIIYQSDMR AHDPVGGCYR  180
YIRDLERQID HDNTELTLVL RQLAFCRAHT AQTITPGIPT ITPDYDVNPN LLLNTPADDT  240
DNVLYDANLF PSMNQPQDQQ QYYNYLCYDT GISRDPNNDP NASSNSNSVN NNVLSLQQQQ  300
QHHHHPHSVM QDEDVKPLVD MFEIRQTLIG GDDEGDSRII NTPNEVGPLH CR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.15e-39LBD family protein